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Automation and visualization of flow cytometry data analysis pipelines

Project Status: Active – The project has reached a stable, usable state and is being actively developed. codecov.io license

What is CytoPipelineUtils?

CytoPipelineUtils is meant to be used in conjunction with CytoPipeline package (see here), which provides support for automation and visualization of flow cytometry data analysis pipelines. CytoPipelineUtils provides a series of wrapper implementations that can in turn be defined as CytoProcessingSteps in CytoPipeline. It is therefore a helper package, which is aimed at hosting wrapper implementations of various functions of various packages.

CytoPipelineUtils is open to contributions. If you want to implement your own wrapper of your favourite pre-processing function and use it in a CytoPipeline object, this is the place to do it! If you do so, please issue a pull request.

License

The CytoPipelineUtils code is provided under GPL license version 3.0 or higher. The documentation, including the manual pages and the vignettes, are distributed under a CC BY-SA 4.0 license.