Changelog • sager

sager 0.3.3

Add Guillaume as contributor.
score param in sagePSM() is now sage_discriminant_score in line with its corresponding fdr.

sager 0.3.2

fdr param in sagePSM() is now spectrum_q, in line with sage v0.13.0.

sager 0.3.1

Update default filename parameter values in sageQFeatures().

sager 0.3.0

Rename functions to create and handle keys across data types: addKey(), filterKey() and getKey().

sager 0.2.1

Add sager vignette.
Update data: sagerMzMLData() now returns the path to 3 separate subsetted mzML files.
New functions to create and handle keys across data types: addKEY(), subsetByKEY() and getKEY().
Update vignette, with MsExperiment workflow.

sager 0.2.0

Update test/subset data and add sage configuration file.
Add a fdr variable to sagePSM() (requires PSMatch >= 1.3.3).

sager 0.1.0

First release with sagePSM() and sageQFeatures() and test data management.